WormBase Tree Display for Variation: WBVar00074419

WBVar00074419 Name: Public_name: WBVar00074419
    Other_name: haw98779
      cewivar00268124
      F02G3.1b.1:c.*152-39C>T
      F02G3.1a.2:c.*120C>T
      F02G3.1c.1:c.*61-39C>T
      F02G3.1a.3:c.*39-39C>T
      F02G3.1a.1:c.*61-39C>T
    HGVSg: CHROMOSOME_X:g.702658C>T
  Sequence_details: SMap: S_parent: Sequence: M02A10
    Flanking_sequences: ttttttttgaattttgttaagattt gctagatggaaatgtattttcaagt
    Mapping_target: M02A10
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (11)
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00017184
    Transcript: F02G3.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F02G3.1c.1:c.*61-39C>T
        Intron_number: 14/14
      F02G3.1a.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F02G3.1a.3:c.*39-39C>T
        Intron_number: 15/15
      F02G3.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F02G3.1b.1:c.*152-39C>T
        Intron_number: 13/13
      F02G3.1a.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F02G3.1a.2:c.*120C>T
        cDNA_position: 2958
        Exon_number: 15/15
      F02G3.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F02G3.1a.1:c.*61-39C>T
        Intron_number: 15/15
  Remark: [20081124 db] this Variation was previously named hw98779
  Method: WGS_Hawaiian_Waterston