WormBase Tree Display for Variation: WBVar00074707
expand all nodes | collapse all nodes | view schema
| WBVar00074707 | Name | Public_name | WBVar00074707 | ||
|---|---|---|---|---|---|
| Other_name | haw99067 | ||||
| cewivar00268480 | |||||
| C05D9.3a.1:c.546+171C>T | |||||
| C05D9.3b.1:c.546+171C>T | |||||
| HGVSg | CHROMOSOME_X:g.1113515C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C05D9 | |
| Flanking_sequences | aaggcagtgacctaggcaggtgcct | tttttgaattattggtcgtatgttt | |||
| Mapping_target | C05D9 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00015472 | |||
| Transcript | C05D9.3a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C05D9.3a.1:c.546+171C>T | ||||
| Intron_number | 6/12 | ||||
| C05D9.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C05D9.3b.1:c.546+171C>T | ||||
| Intron_number | 5/12 | ||||
| Remark | [20081124 db] this Variation was previously named hw99067 | ||||
| Method | WGS_Hawaiian_Waterston |
