WormBase Tree Display for Variation: WBVar00074840
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WBVar00074840 | Name | Public_name | WBVar00074840 | ||
---|---|---|---|---|---|
Other_name | haw99200 | ||||
cewivar00268637 | |||||
H42K12.3.1:c.842-34T>C | |||||
H42K12.3.3:c.842-34T>C | |||||
H42K12.3.2:c.842-34T>C | |||||
HGVSg | CHROMOSOME_X:g.1314306T>C | ||||
Sequence_details | SMap | S_parent | Sequence | H42K12 | |
Flanking_sequences | ggcccattgagctctaagaaaaata | acccagcctaaaaatttaatttaaa | |||
Mapping_target | H42K12 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00019272 | |||
Transcript | H42K12.3.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H42K12.3.3:c.842-34T>C | ||||
Intron_number | 8/12 | ||||
H42K12.3.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H42K12.3.1:c.842-34T>C | ||||
Intron_number | 7/11 | ||||
H42K12.3.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H42K12.3.2:c.842-34T>C | ||||
Intron_number | 7/11 | ||||
Remark | [20081124 db] this Variation was previously named hw99200 | ||||
Method | WGS_Hawaiian_Waterston |