WormBase Tree Display for Variation: WBVar00075291
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| WBVar00075291 | Name | Public_name | WBVar00075291 | ||
|---|---|---|---|---|---|
| Other_name | haw99651 | ||||
| cewivar00269359 | |||||
| K06A9.1g.1:c.5101+2440A>T | |||||
| K06A9.1f.1:c.4825+2716A>T | |||||
| K06A9.1b.1:c.7207+205A>T | |||||
| K06A9.1e.1:c.4280-3106A>T | |||||
| K06A9.1c.1:c.1895-3106A>T | |||||
| K06A9.1a.1:c.2771-3106A>T | |||||
| K06A9.1d.1:c.3533-3106A>T | |||||
| HGVSg | CHROMOSOME_X:g.1555349A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | H02F09 | |
| Flanking_sequences | ccaacttcaagtttcccctccacat | acccaatccgtcgtctacttccttt | |||
| Mapping_target | H02F09 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019435 | |||
| Transcript | K06A9.1d.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | K06A9.1d.1:c.3533-3106A>T | ||||
| Intron_number | 7/12 | ||||
| K06A9.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K06A9.1c.1:c.1895-3106A>T | ||||
| Intron_number | 8/14 | ||||
| K06A9.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K06A9.1b.1:c.7207+205A>T | ||||
| Intron_number | 8/13 | ||||
| K06A9.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K06A9.1g.1:c.5101+2440A>T | ||||
| Intron_number | 7/12 | ||||
| K06A9.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K06A9.1e.1:c.4280-3106A>T | ||||
| Intron_number | 7/12 | ||||
| K06A9.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K06A9.1f.1:c.4825+2716A>T | ||||
| Intron_number | 7/12 | ||||
| K06A9.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K06A9.1a.1:c.2771-3106A>T | ||||
| Intron_number | 8/14 | ||||
| Remark | [20081124 db] this Variation was previously named hw99651 | ||||
| Method | WGS_Hawaiian_Waterston |
