WormBase Tree Display for Variation: WBVar00075323
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WBVar00075323 | Name | Public_name | WBVar00075323 | ||
---|---|---|---|---|---|
Other_name | haw99683 | ||||
cewivar00269415 | |||||
K06A9.1f.1:c.5288-22T>C | |||||
K06A9.1a.1:c.3233-22T>C | |||||
K06A9.1c.1:c.2357-22T>C | |||||
K06A9.1d.1:c.3995-22T>C | |||||
K06A9.1e.1:c.4742-22T>C | |||||
K06A9.1b.1:c.7670-22T>C | |||||
K06A9.1g.1:c.5564-22T>C | |||||
HGVSg | CHROMOSOME_X:g.1559585T>C | ||||
Sequence_details | SMap | S_parent | Sequence | H02F09 | |
Flanking_sequences | agagttcattccaagttaccagttt | aacaacttgtaaagttttcaggagc | |||
Mapping_target | H02F09 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00019435 | |||
Transcript | K06A9.1d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K06A9.1d.1:c.3995-22T>C | ||||
Intron_number | 12/12 | ||||
K06A9.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K06A9.1c.1:c.2357-22T>C | ||||
Intron_number | 13/14 | ||||
K06A9.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K06A9.1b.1:c.7670-22T>C | ||||
Intron_number | 13/13 | ||||
K06A9.1g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K06A9.1g.1:c.5564-22T>C | ||||
Intron_number | 12/12 | ||||
K06A9.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K06A9.1e.1:c.4742-22T>C | ||||
Intron_number | 12/12 | ||||
K06A9.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K06A9.1f.1:c.5288-22T>C | ||||
Intron_number | 12/12 | ||||
K06A9.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K06A9.1a.1:c.3233-22T>C | ||||
Intron_number | 13/14 | ||||
Remark | [20081124 db] this Variation was previously named hw99683 | ||||
Method | WGS_Hawaiian_Waterston |