WormBase Tree Display for Variation: WBVar00075611
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| WBVar00075611 | Name | Public_name | WBVar00075611 | ||
|---|---|---|---|---|---|
| Other_name | haw99971 | ||||
| cewivar00269826 | |||||
| ZC53.1.1:c.1453T>A | |||||
| CE50230:p.Ter485ArgextTer2 | |||||
| HGVSg | CHROMOSOME_X:g.1911403A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | ZC53 | |
| Flanking_sequences | taaaaggtaaataatgaagattttc | ggcttcctcattcattaaaaaaatc | |||
| Mapping_target | ZC53 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00022508 | |||
| Transcript | ZC53.1.1 | VEP_consequence | stop_lost | ||
| VEP_impact | HIGH | ||||
| HGVSc | ZC53.1.1:c.1453T>A | ||||
| HGVSp | CE50230:p.Ter485ArgextTer2 | ||||
| cDNA_position | 1461 | ||||
| CDS_position | 1453 | ||||
| Protein_position | 485 | ||||
| Exon_number | 9/10 | ||||
| Codon_change | Tga/Aga | ||||
| Amino_acid_change | */R | ||||
| Remark | [20081124 db] this Variation was previously named hw99971 | ||||
| Method | WGS_Hawaiian_Waterston |
