WormBase Tree Display for Variation: WBVar00075762
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WBVar00075762 | Name | Public_name | WBVar00075762 | ||
---|---|---|---|---|---|
Other_name | haw100122 | ||||
cewivar00270057 | |||||
F53B1.8a.1:c.1849-46T>C | |||||
F53B1.15:n.31A>G | |||||
F53B1.8b.1:c.1675-46T>C | |||||
HGVSg | CHROMOSOME_X:g.2125583A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F53B1 | |
Flanking_sequences | atgtgatttaaaattggaggattta | aggattaaaagacaattcgttcttc | |||
Mapping_target | F53B1 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00018739 | |||
WBGene00201321 | |||||
Transcript | F53B1.15 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F53B1.15:n.31A>G | ||||
cDNA_position | 31 | ||||
Exon_number | 1/1 | ||||
F53B1.8b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F53B1.8b.1:c.1675-46T>C | ||||
Intron_number | 7/9 | ||||
F53B1.8a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F53B1.8a.1:c.1849-46T>C | ||||
Intron_number | 9/12 | ||||
Remark | [20081124 db] this Variation was previously named hw100122 | ||||
Method | WGS_Hawaiian_Waterston |