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WormBase Tree Display for Variation: WBVar00075762

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Name Class

WBVar00075762NamePublic_nameWBVar00075762
Other_namehaw100122
cewivar00270057
F53B1.8a.1:c.1849-46T>C
F53B1.15:n.31A>G
F53B1.8b.1:c.1675-46T>C
HGVSgCHROMOSOME_X:g.2125583A>G
Sequence_detailsSMapS_parentSequenceF53B1
Flanking_sequencesatgtgatttaaaattggaggatttaaggattaaaagacaattcgttcttc
Mapping_targetF53B1
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00006640From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00018739
WBGene00201321
TranscriptF53B1.15VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScF53B1.15:n.31A>G
cDNA_position31
Exon_number1/1
F53B1.8b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53B1.8b.1:c.1675-46T>C
Intron_number7/9
F53B1.8a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53B1.8a.1:c.1849-46T>C
Intron_number9/12
Remark[20081124 db] this Variation was previously named hw100122
MethodWGS_Hawaiian_Waterston