WormBase Tree Display for Variation: WBVar00076277

WBVar00076277 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00076277
    Other_name: snp_F52H2[4]
      haw100637
      cewivar00270715
      CE53250:p.Thr74=
      F52H2.7.1:c.222A>C
    HGVSg: CHROMOSOME_X:g.2572368T>G
  Sequence_details: SMap: S_parent: Sequence: F52H2
    Flanking_sequences: tttaccttaactgcaaccattcttc gtcagttctctctcgtctgtgtcga
    Mapping_target: F52H2
    Type_of_mutation: Substitution: T G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022868 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022878 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022886 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar00244969
    Status: Live
  Affects: Gene: WBGene00018719
    Transcript: F52H2.7.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F52H2.7.1:c.222A>C
        HGVSp: CE53250:p.Thr74=
        cDNA_position: 233
        CDS_position: 222
        Protein_position: 74
        Exon_number: 3/18
        Codon_change: acA/acC
        Amino_acid_change: T
  Reference: WBPaper00004703
  Remark: [20081124 db] this Variation was previously named hw100637
  Method: WGS_Hawaiian_Waterston