WormBase Tree Display for Variation: WBVar00076778
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| WBVar00076778 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00076778 | |||
| Other_name | haw101138 | ||||
| cewivar00271368 | |||||
| C33D12.2b.2:c.-9-534C>T | |||||
| C33D12.2b.4:c.-9-534C>T | |||||
| C33D12.2b.3:c.-9-534C>T | |||||
| C33D12.2a.1:c.1633-534C>T | |||||
| C33D12.2b.5:c.-9-534C>T | |||||
| C33D12.2b.1:c.-9-534C>T | |||||
| C33D12.2b.6:c.-9-534C>T | |||||
| C33D12.2c.1:c.1633-534C>T | |||||
| HGVSg | CHROMOSOME_X:g.3039559G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | M02F4 | |
| Flanking_sequences | ttgtagtttttttctagaattctga | taaaaattttggagaatttctaaat | |||
| Mapping_target | M02F4 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| Laboratory | RW | ||||
| QX | |||||
| Person | WBPerson1562 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01468145 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00016343 | |||
| Transcript | C33D12.2c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C33D12.2c.1:c.1633-534C>T | ||||
| Intron_number | 9/15 | ||||
| C33D12.2b.4 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C33D12.2b.4:c.-9-534C>T | ||||
| Intron_number | 8/14 | ||||
| C33D12.2b.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C33D12.2b.3:c.-9-534C>T | ||||
| Intron_number | 7/13 | ||||
| C33D12.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C33D12.2a.1:c.1633-534C>T | ||||
| Intron_number | 10/15 | ||||
| C33D12.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C33D12.2b.1:c.-9-534C>T | ||||
| Intron_number | 9/15 | ||||
| C33D12.2b.6 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C33D12.2b.6:c.-9-534C>T | ||||
| Intron_number | 1/7 | ||||
| C33D12.2b.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C33D12.2b.2:c.-9-534C>T | ||||
| Intron_number | 7/13 | ||||
| C33D12.2b.5 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C33D12.2b.5:c.-9-534C>T | ||||
| Intron_number | 2/8 | ||||
| Reference | WBPaper00040707 | ||||
| Remark | [20081124 db] this Variation was previously named hw101138 | ||||
| Method | WGS_Hawaiian_Waterston |
