WormBase Tree Display for Variation: WBVar00076784
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WBVar00076784 | Name | Public_name | WBVar00076784 | ||
---|---|---|---|---|---|
Other_name | haw101144 | ||||
cewivar00271374 | |||||
C33D12.2b.5:c.-423G>T | |||||
C33D12.2b.4:c.-356-67G>T | |||||
C33D12.2b.2:c.-356-67G>T | |||||
C33D12.2b.1:c.-356-67G>T | |||||
C33D12.2c.1:c.1286-67G>T | |||||
C33D12.2a.1:c.1286-67G>T | |||||
C33D12.2b.3:c.-356-67G>T | |||||
HGVSg | CHROMOSOME_X:g.3042544C>A | ||||
Sequence_details | SMap | S_parent | Sequence | C33D12 | |
Flanking_sequences | taagctatcaaattgaattttcagg | aaaatagttatttcagctcactttt | |||
Mapping_target | C33D12 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00016343 | |||
Transcript | C33D12.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C33D12.2a.1:c.1286-67G>T | ||||
Intron_number | 8/15 | ||||
C33D12.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C33D12.2c.1:c.1286-67G>T | ||||
Intron_number | 7/15 | ||||
C33D12.2b.4 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C33D12.2b.4:c.-356-67G>T | ||||
Intron_number | 6/14 | ||||
C33D12.2b.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C33D12.2b.3:c.-356-67G>T | ||||
Intron_number | 5/13 | ||||
C33D12.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C33D12.2b.1:c.-356-67G>T | ||||
Intron_number | 7/15 | ||||
C33D12.2b.5 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C33D12.2b.5:c.-423G>T | ||||
cDNA_position | 231 | ||||
Exon_number | 1/9 | ||||
C33D12.2b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C33D12.2b.2:c.-356-67G>T | ||||
Intron_number | 5/13 | ||||
Remark | [20081124 db] this Variation was previously named hw101144 | ||||
Method | WGS_Hawaiian_Waterston |