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WormBase Tree Display for Variation: WBVar00076784

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Name Class

WBVar00076784NamePublic_nameWBVar00076784
Other_namehaw101144
cewivar00271374
C33D12.2b.5:c.-423G>T
C33D12.2b.4:c.-356-67G>T
C33D12.2b.2:c.-356-67G>T
C33D12.2b.1:c.-356-67G>T
C33D12.2c.1:c.1286-67G>T
C33D12.2a.1:c.1286-67G>T
C33D12.2b.3:c.-356-67G>T
HGVSgCHROMOSOME_X:g.3042544C>A
Sequence_detailsSMapS_parentSequenceC33D12
Flanking_sequencestaagctatcaaattgaattttcaggaaaatagttatttcagctcactttt
Mapping_targetC33D12
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00016343
TranscriptC33D12.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC33D12.2a.1:c.1286-67G>T
Intron_number8/15
C33D12.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC33D12.2c.1:c.1286-67G>T
Intron_number7/15
C33D12.2b.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC33D12.2b.4:c.-356-67G>T
Intron_number6/14
C33D12.2b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC33D12.2b.3:c.-356-67G>T
Intron_number5/13
C33D12.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC33D12.2b.1:c.-356-67G>T
Intron_number7/15
C33D12.2b.5VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC33D12.2b.5:c.-423G>T
cDNA_position231
Exon_number1/9
C33D12.2b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC33D12.2b.2:c.-356-67G>T
Intron_number5/13
Remark[20081124 db] this Variation was previously named hw101144
MethodWGS_Hawaiian_Waterston