WormBase Tree Display for Variation: WBVar00076786
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| WBVar00076786 | Evidence | Paper_evidence | WBPaper00005369 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00076786 | |||
| Other_name | uCE6-793 | ||||
| haw101146 | |||||
| cewivar00271376 | |||||
| C33D12.2b.2:c.-1185-131A>G | |||||
| C33D12.2b.1:c.-1596-131A>G | |||||
| C33D12.2a.1:c.76-131A>G | |||||
| C33D12.2c.1:c.76-131A>G | |||||
| C33D12.2b.3:c.-1155-131A>G | |||||
| HGVSg | CHROMOSOME_X:g.3045122T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | C33D12 | |
| Flanking_sequences | agaaagtttttgaaactacaaagac | aaatagcgtagtaaaacttttcaaa | |||
| Mapping_target | C33D12 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| SNP_Swan | |||||
| History | Acquires_merge | WBVar00274137 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00016343 | |||
| Transcript | C33D12.2a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C33D12.2a.1:c.76-131A>G | ||||
| Intron_number | 2/15 | ||||
| C33D12.2c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C33D12.2c.1:c.76-131A>G | ||||
| Intron_number | 1/15 | ||||
| C33D12.2b.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C33D12.2b.3:c.-1155-131A>G | ||||
| Intron_number | 1/13 | ||||
| C33D12.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C33D12.2b.1:c.-1596-131A>G | ||||
| Intron_number | 1/15 | ||||
| C33D12.2b.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C33D12.2b.2:c.-1185-131A>G | ||||
| Intron_number | 1/13 | ||||
| Reference | WBPaper00005369 | ||||
| Remark | [20081124 db] this Variation was previously named hw101146 | ||||
| Method | WGS_Hawaiian_Waterston |
