WormBase Tree Display for Variation: WBVar00077374
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WBVar00077374 | Name | Public_name | WBVar00077374 | ||
---|---|---|---|---|---|
Other_name | haw101734 | ||||
cewivar00272117 | |||||
R02E12.6.1:c.-4+772T>C | |||||
R02E12.2a.1:c.718+2276A>G | |||||
HGVSg | CHROMOSOME_X:g.4015223A>G | ||||
Sequence_details | SMap | S_parent | Sequence | R02E12 | |
Flanking_sequences | ctggcaaaaaatatttgtttactta | aaatgtcctttttgatatttttgca | |||
Mapping_target | R02E12 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00019827 | |||
WBGene00019830 | |||||
Transcript | R02E12.6.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R02E12.6.1:c.-4+772T>C | ||||
Intron_number | 1/5 | ||||
R02E12.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R02E12.2a.1:c.718+2276A>G | ||||
Intron_number | 2/7 | ||||
Remark | [20081124 db] this Variation was previously named hw101734 | ||||
Method | WGS_Hawaiian_Waterston |