WormBase Tree Display for Variation: WBVar00077628

WBVar00077628 Name: Public_name: WBVar00077628
    Other_name: haw101988
      cewivar00272442
      W01H2.3a.1:c.-3-778G>T
      W01H2.3a.2:c.-3-778G>T
      W01H2.3c.1:c.58-778G>T
    HGVSg: CHROMOSOME_X:g.4231988C>A
  Sequence_details: SMap: S_parent: Sequence: W01H2
    Flanking_sequences: atcaattacgagagtgtaaaattat tttagatttttaaatcttggggcag
    Mapping_target: W01H2
    Type_of_mutation: Substitution: C A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Hawaiian_Waterston
      WBStrain00022878 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00004285
    Transcript: W01H2.3c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W01H2.3c.1:c.58-778G>T
        Intron_number: 1/6
      W01H2.3a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W01H2.3a.2:c.-3-778G>T
        Intron_number: 1/8
      W01H2.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W01H2.3a.1:c.-3-778G>T
        Intron_number: 2/9
  Remark: [20081124 db] this Variation was previously named hw101988
  Method: WGS_Hawaiian_Waterston