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WormBase Tree Display for Variation: WBVar00077691

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Name Class

WBVar00077691NamePublic_nameWBVar00077691
Other_namehaw102051
cewivar00272518
C52B9.2.5:c.502+7T>A
C52B9.2.3:c.502+7T>A
C52B9.2.2:c.502+7T>A
C52B9.2.1:c.502+7T>A
C52B9.2.4:c.502+7T>A
HGVSgCHROMOSOME_X:g.4282038T>A
Sequence_detailsSMapS_parentSequenceC52B9
Flanking_sequencesaagctgaaaaagggaacacgtaagtgttttacttattttatatgttagtc
Mapping_targetC52B9
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00022902From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00016865
TranscriptC52B9.2.4VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScC52B9.2.4:c.502+7T>A
Intron_number7/8
C52B9.2.2VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScC52B9.2.2:c.502+7T>A
Intron_number6/7
C52B9.2.5VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScC52B9.2.5:c.502+7T>A
Intron_number6/7
C52B9.2.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScC52B9.2.1:c.502+7T>A
Intron_number5/6
C52B9.2.3VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScC52B9.2.3:c.502+7T>A
Intron_number7/8
Remark[20081124 db] this Variation was previously named hw102051
MethodWGS_Hawaiian_Waterston