WormBase Tree Display for Variation: WBVar00077823
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WBVar00077823 | Name | Public_name | WBVar00077823 | ||
---|---|---|---|---|---|
Other_name | haw102183 | ||||
cewivar00272680 | |||||
R160.1b.1:c.424-186A>T | |||||
R160.1a.1:c.441+4A>T | |||||
HGVSg | CHROMOSOME_X:g.4390853A>T | ||||
Sequence_details | SMap | S_parent | Sequence | R160 | |
Flanking_sequences | ataggatgctcctgtcccagtggta | gttttcatatgtatatattgtgacc | |||
Mapping_target | R160 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001082 | |||
Transcript | R160.1a.1 | VEP_consequence | splice_region_variant,intron_variant | ||
VEP_impact | LOW | ||||
HGVSc | R160.1a.1:c.441+4A>T | ||||
Intron_number | 5/12 | ||||
R160.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R160.1b.1:c.424-186A>T | ||||
Intron_number | 4/11 | ||||
Remark | [20081124 db] this Variation was previously named hw102183 | ||||
Method | WGS_Hawaiian_Waterston |