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WormBase Tree Display for Variation: WBVar00078287

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Name Class

WBVar00078287NamePublic_nameWBVar00078287
Other_namehaw102647
cewivar00273266
R08E3.1b.2:c.2149-101T>A
R08E3.1a.1:c.2149-101T>A
R08E3.1b.1:c.2149-101T>A
HGVSgCHROMOSOME_X:g.4827101T>A
Sequence_detailsSMapS_parentSequenceR08E3
Flanking_sequencescaagttgtcaggacttgttggttgatcctcacatactgctgttgaagagt
Mapping_targetR08E3
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00019957
TranscriptR08E3.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR08E3.1b.1:c.2149-101T>A
Intron_number18/47
R08E3.1b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR08E3.1b.2:c.2149-101T>A
Intron_number18/46
R08E3.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR08E3.1a.1:c.2149-101T>A
Intron_number18/48
Remark[20081124 db] this Variation was previously named hw102647
MethodWGS_Hawaiian_Waterston