WormBase Tree Display for Variation: WBVar00078287
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WBVar00078287 | Name | Public_name | WBVar00078287 | ||
---|---|---|---|---|---|
Other_name | haw102647 | ||||
cewivar00273266 | |||||
R08E3.1b.2:c.2149-101T>A | |||||
R08E3.1a.1:c.2149-101T>A | |||||
R08E3.1b.1:c.2149-101T>A | |||||
HGVSg | CHROMOSOME_X:g.4827101T>A | ||||
Sequence_details | SMap | S_parent | Sequence | R08E3 | |
Flanking_sequences | caagttgtcaggacttgttggttga | tcctcacatactgctgttgaagagt | |||
Mapping_target | R08E3 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (12) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00019957 | |||
Transcript | R08E3.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R08E3.1b.1:c.2149-101T>A | ||||
Intron_number | 18/47 | ||||
R08E3.1b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R08E3.1b.2:c.2149-101T>A | ||||
Intron_number | 18/46 | ||||
R08E3.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R08E3.1a.1:c.2149-101T>A | ||||
Intron_number | 18/48 | ||||
Remark | [20081124 db] this Variation was previously named hw102647 | ||||
Method | WGS_Hawaiian_Waterston |