WormBase Tree Display for Variation: WBVar00078316

WBVar00078316 Name: Public_name: WBVar00078316
    Other_name: haw102676
      cewivar00273309
      F39C12.2a.1:c.1994-333C>T
      F39C12.2d.1:c.1978-158C>T
      F39C12.2b.1:c.2128-158C>T
      F39C12.2c.1:c.2038-158C>T
    HGVSg: CHROMOSOME_X:g.4854632G>A
  Sequence_details: SMap: S_parent: Sequence: F39C12
    Flanking_sequences: tatatagagaatacaactgtaaaaa tttaattttttcattgaattttttt
    Mapping_target: F39C12
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Hawaiian_Waterston
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00000072
    Transcript: F39C12.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39C12.2b.1:c.2128-158C>T
        Intron_number: 18/19
      F39C12.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39C12.2a.1:c.1994-333C>T
        Intron_number: 15/16
      F39C12.2c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39C12.2c.1:c.2038-158C>T
        Intron_number: 17/18
      F39C12.2d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39C12.2d.1:c.1978-158C>T
        Intron_number: 15/16
  Remark: [20081124 db] this Variation was previously named hw102676
  Method: WGS_Hawaiian_Waterston