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WormBase Tree Display for Variation: WBVar00078317

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Name Class

WBVar00078317NamePublic_nameWBVar00078317
Other_namehaw102677
cewivar00273310
F39C12.2d.1:c.1977+36T>C
F39C12.2c.1:c.2037+36T>C
F39C12.2a.1:c.1993+358T>C
F39C12.2b.1:c.2127+36T>C
HGVSgCHROMOSOME_X:g.4854794A>G
Sequence_detailsSMapS_parentSequenceF39C12
Flanking_sequencesaacctcattcttttttaagtttgaacatttgaaaaactatttgcttccaa
Mapping_targetF39C12
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000072
TranscriptF39C12.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2b.1:c.2127+36T>C
Intron_number18/19
F39C12.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2a.1:c.1993+358T>C
Intron_number15/16
F39C12.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2c.1:c.2037+36T>C
Intron_number17/18
F39C12.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2d.1:c.1977+36T>C
Intron_number15/16
Remark[20081124 db] this Variation was previously named hw102677
MethodWGS_Hawaiian_Waterston