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WormBase Tree Display for Variation: WBVar00078411

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Name Class

WBVar00078411NamePublic_nameWBVar00078411
Other_namehaw102771
cewivar00125735
K05B2.5c.1:c.1847-39T>A
K05B2.5b.1:c.1847-39T>A
K05B2.5a.2:c.1682-39T>A
K05B2.5a.1:c.1682-39T>A
HGVSgCHROMOSOME_X:g.4923269A>T
Sequence_detailsSMapS_parentSequenceK05B2
Flanking_sequencesaaaaaattttgtgagtttttttttaaaataaaccaaattctaaatgttga
Mapping_targetK05B2
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00023138From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00003986
TranscriptK05B2.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK05B2.5a.2:c.1682-39T>A
Intron_number9/13
K05B2.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK05B2.5c.1:c.1847-39T>A
Intron_number9/12
K05B2.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK05B2.5b.1:c.1847-39T>A
Intron_number9/14
K05B2.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK05B2.5a.1:c.1682-39T>A
Intron_number10/14
Remark[20081124 db] this Variation was previously named hw102771
MethodWGS_Hawaiian_Waterston