WormBase Tree Display for Variation: WBVar00078616
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WBVar00078616 | Name | Public_name | WBVar00078616 | ||
---|---|---|---|---|---|
Other_name | haw102976 | ||||
cewivar00273447 | |||||
C31H2.1c.2:c.1459-301A>C | |||||
C31H2.1a.1:c.1885-301A>C | |||||
C31H2.1c.1:c.1459-301A>C | |||||
C31H2.1b.1:c.1765-301A>C | |||||
HGVSg | CHROMOSOME_X:g.5145830A>C | ||||
Sequence_details | SMap | S_parent | Sequence | C31H2 | |
Flanking_sequences | ccattttgattcaaccatttgaaaa | gtgcaaaaaaatggcccggaattgt | |||
Mapping_target | C31H2 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00016292 | |||
Transcript | C31H2.1c.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C31H2.1c.2:c.1459-301A>C | ||||
Intron_number | 14/15 | ||||
C31H2.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C31H2.1b.1:c.1765-301A>C | ||||
Intron_number | 16/17 | ||||
C31H2.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C31H2.1a.1:c.1885-301A>C | ||||
Intron_number | 18/19 | ||||
C31H2.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C31H2.1c.1:c.1459-301A>C | ||||
Intron_number | 15/16 | ||||
Remark | [20081124 db] this Variation was previously named hw102976 | ||||
Method | WGS_Hawaiian_Waterston |