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WormBase Tree Display for Variation: WBVar00078616

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Name Class

WBVar00078616NamePublic_nameWBVar00078616
Other_namehaw102976
cewivar00273447
C31H2.1c.2:c.1459-301A>C
C31H2.1a.1:c.1885-301A>C
C31H2.1c.1:c.1459-301A>C
C31H2.1b.1:c.1765-301A>C
HGVSgCHROMOSOME_X:g.5145830A>C
Sequence_detailsSMapS_parentSequenceC31H2
Flanking_sequencesccattttgattcaaccatttgaaaagtgcaaaaaaatggcccggaattgt
Mapping_targetC31H2
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00016292
TranscriptC31H2.1c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC31H2.1c.2:c.1459-301A>C
Intron_number14/15
C31H2.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC31H2.1b.1:c.1765-301A>C
Intron_number16/17
C31H2.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC31H2.1a.1:c.1885-301A>C
Intron_number18/19
C31H2.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC31H2.1c.1:c.1459-301A>C
Intron_number15/16
Remark[20081124 db] this Variation was previously named hw102976
MethodWGS_Hawaiian_Waterston