WormBase Tree Display for Variation: WBVar00078750
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WBVar00078750 | Name | Public_name | WBVar00078750 | ||
---|---|---|---|---|---|
Other_name | haw103110 | ||||
cewivar00126176 | |||||
CE50202:p.Ser51Leu | |||||
T03G11.1c.1:c.449C>T | |||||
T03G11.1b.1:c.152C>T | |||||
CE50306:p.Ser143Leu | |||||
T03G11.1d.1:c.428C>T | |||||
CE50267:p.Ser150Leu | |||||
HGVSg | CHROMOSOME_X:g.5198163C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T03G11 | |
Flanking_sequences | ttaaatgacagaagttactcaatat | atcaactgttcatttatctaacggg | |||
Mapping_target | T03G11 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (11) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00004145 | |||
Transcript | T03G11.1b.1 | VEP_consequence | missense_variant | ||
VEP_impact | MODERATE | ||||
HGVSc | T03G11.1b.1:c.152C>T | ||||
HGVSp | CE50202:p.Ser51Leu | ||||
cDNA_position | 152 | ||||
CDS_position | 152 | ||||
Protein_position | 51 | ||||
Exon_number | 1/17 | ||||
Codon_change | tCa/tTa | ||||
Amino_acid_change | S/L | ||||
T03G11.1d.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | ||||
HGVSc | T03G11.1d.1:c.428C>T | ||||
HGVSp | CE50306:p.Ser143Leu | ||||
cDNA_position | 428 | ||||
CDS_position | 428 | ||||
Protein_position | 143 | ||||
Exon_number | 3/18 | ||||
Codon_change | tCa/tTa | ||||
Amino_acid_change | S/L | ||||
T03G11.1c.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | ||||
HGVSc | T03G11.1c.1:c.449C>T | ||||
HGVSp | CE50267:p.Ser150Leu | ||||
cDNA_position | 449 | ||||
CDS_position | 449 | ||||
Protein_position | 150 | ||||
Exon_number | 3/19 | ||||
Codon_change | tCa/tTa | ||||
Amino_acid_change | S/L | ||||
Remark | [20081124 db] this Variation was previously named hw103110 | ||||
Method | WGS_Hawaiian_Waterston |