WormBase Tree Display for Variation: WBVar00078909
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WBVar00078909 | Name | Public_name | WBVar00078909 | ||
---|---|---|---|---|---|
Other_name | haw103269 | ||||
cewivar00273492 | |||||
Y34B4A.8b.2:c.-1294+833A>G | |||||
Y34B4A.8a.1:c.-66+833A>G | |||||
Y34B4A.8e.1:c.79+833A>G | |||||
Y34B4A.3.1:c.834-225T>C | |||||
Y34B4A.8c.1:c.79+833A>G | |||||
HGVSg | CHROMOSOME_X:g.5277770T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y34B4A | |
Flanking_sequences | tcatataaaatctagaaaacttttt | ggtatttttatcatgatattccgtc | |||
Mapping_target | Y34B4A | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00002031 | |||
WBGene00021324 | |||||
Transcript | Y34B4A.8c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y34B4A.8c.1:c.79+833A>G | ||||
Intron_number | 2/16 | ||||
Y34B4A.8e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y34B4A.8e.1:c.79+833A>G | ||||
Intron_number | 2/15 | ||||
Y34B4A.3.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y34B4A.3.1:c.834-225T>C | ||||
Intron_number | 6/8 | ||||
Y34B4A.8b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y34B4A.8b.2:c.-1294+833A>G | ||||
Intron_number | 1/15 | ||||
Y34B4A.8a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y34B4A.8a.1:c.-66+833A>G | ||||
Intron_number | 1/16 | ||||
Remark | [20081124 db] this Variation was previously named hw103269 | ||||
Method | WGS_Hawaiian_Waterston |