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WormBase Tree Display for Variation: WBVar00078909

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Name Class

WBVar00078909NamePublic_nameWBVar00078909
Other_namehaw103269
cewivar00273492
Y34B4A.8b.2:c.-1294+833A>G
Y34B4A.8a.1:c.-66+833A>G
Y34B4A.8e.1:c.79+833A>G
Y34B4A.3.1:c.834-225T>C
Y34B4A.8c.1:c.79+833A>G
HGVSgCHROMOSOME_X:g.5277770T>C
Sequence_detailsSMapS_parentSequenceY34B4A
Flanking_sequencestcatataaaatctagaaaactttttggtatttttatcatgatattccgtc
Mapping_targetY34B4A
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00002031
WBGene00021324
TranscriptY34B4A.8c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY34B4A.8c.1:c.79+833A>G
Intron_number2/16
Y34B4A.8e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY34B4A.8e.1:c.79+833A>G
Intron_number2/15
Y34B4A.3.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY34B4A.3.1:c.834-225T>C
Intron_number6/8
Y34B4A.8b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY34B4A.8b.2:c.-1294+833A>G
Intron_number1/15
Y34B4A.8a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY34B4A.8a.1:c.-66+833A>G
Intron_number1/16
Remark[20081124 db] this Variation was previously named hw103269
MethodWGS_Hawaiian_Waterston