WormBase Tree Display for Variation: WBVar00078984
expand all nodes | collapse all nodes | view schema
WBVar00078984 | Name | Public_name | WBVar00078984 | ||
---|---|---|---|---|---|
Other_name | haw103344 | ||||
cewivar00126525 | |||||
F35C8.9:n.3G>A | |||||
F35C8.3.1:c.*1224G>A | |||||
F35C8.3.2:c.*186G>A | |||||
HGVSg | CHROMOSOME_X:g.5373034G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F35C8 | |
Flanking_sequences | tataacttgctatcaagagcacaat | cctgctgctccaaactacagtatta | |||
Mapping_target | F35C8 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00077784 | |||
WBGene00002177 | |||||
Transcript | F35C8.3.2 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F35C8.3.2:c.*186G>A | ||||
cDNA_position | 1691 | ||||
Exon_number | 15/17 | ||||
F35C8.3.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F35C8.3.1:c.*1224G>A | ||||
cDNA_position | 2729 | ||||
Exon_number | 14/16 | ||||
Pseudogene | F35C8.9 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F35C8.9:n.3G>A | ||||
cDNA_position | 3 | ||||
Exon_number | 1/4 | ||||
Remark | [20081124 db] this Variation was previously named hw103344 | ||||
Method | WGS_Hawaiian_Waterston |