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WormBase Tree Display for Variation: WBVar00079218

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Name Class

WBVar00079218NamePublic_nameWBVar00079218
Other_namehaw103578
cewivar00273650
F14D12.4k.1:c.145+1553T>C
F14D12.4q.1:c.76+7020T>C
F14D12.4d.1:c.145+1553T>C
F14D12.4m.1:c.145+1553T>C
F14D12.4h.1:c.145+1553T>C
HGVSgCHROMOSOME_X:g.5574849T>C
Sequence_detailsSMapS_parentSequenceC38C5
Flanking_sequencescaaaaaaatacgtttcgtaaatagtgtttgttttgaaaataggggttatt
Mapping_targetC38C5
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00003166
TranscriptF14D12.4m.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF14D12.4m.1:c.145+1553T>C
Intron_number1/13
F14D12.4k.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF14D12.4k.1:c.145+1553T>C
Intron_number2/10
F14D12.4q.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF14D12.4q.1:c.76+7020T>C
Intron_number1/11
F14D12.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF14D12.4d.1:c.145+1553T>C
Intron_number2/14
F14D12.4h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF14D12.4h.1:c.145+1553T>C
Intron_number1/11
Remark[20081124 db] this Variation was previously named hw103578
MethodWGS_Hawaiian_Waterston