WormBase Tree Display for Variation: WBVar00079303
expand all nodes | collapse all nodes | view schema
WBVar00079303 | Name | Public_name | WBVar00079303 | ||
---|---|---|---|---|---|
Other_name | haw103663 | ||||
cewivar00273712 | |||||
W01C8.5a.1:c.*88C>T | |||||
W01C8.5b.1:c.*88C>T | |||||
HGVSg | CHROMOSOME_X:g.5694745G>A | ||||
Sequence_details | SMap | S_parent | Sequence | W01C8 | |
Flanking_sequences | taatacagtaattcaaagaatgaag | gagaagaaagagactgggaaagaga | |||
Mapping_target | W01C8 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00020921 | |||
Transcript | W01C8.5b.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W01C8.5b.1:c.*88C>T | ||||
cDNA_position | 1317 | ||||
Exon_number | 9/9 | ||||
W01C8.5a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01C8.5a.1:c.*88C>T | ||||
cDNA_position | 1633 | ||||
Exon_number | 11/11 | ||||
Remark | [20081124 db] this Variation was previously named hw103663 | ||||
Method | WGS_Hawaiian_Waterston |