WormBase Tree Display for Variation: WBVar00079390
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WBVar00079390 | Name | Public_name | WBVar00079390 | ||
---|---|---|---|---|---|
Other_name | haw103750 | ||||
cewivar00273812 | |||||
C54H2.1b.2:c.-36+987A>G | |||||
C54H2.1a.2:c.-36+987A>G | |||||
HGVSg | CHROMOSOME_X:g.5774844A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C54H2 | |
Flanking_sequences | atagattttctgagttaaaaaattg | ttttgccccagaatttttttaactg | |||
Mapping_target | C54H2 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006368 | |||
Transcript | C54H2.1a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C54H2.1a.2:c.-36+987A>G | ||||
Intron_number | 1/9 | ||||
C54H2.1b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54H2.1b.2:c.-36+987A>G | ||||
Intron_number | 1/8 | ||||
Remark | [20081124 db] this Variation was previously named hw103750 | ||||
Method | WGS_Hawaiian_Waterston |