WormBase Tree Display for Variation: WBVar00080775

WBVar00080775 Name: Public_name: WBVar00080775
    Other_name (14)
    HGVSg: CHROMOSOME_X:g.7853738T>C
  Sequence_details: SMap: S_parent: Sequence: C54D2
    Flanking_sequences: cagagcttaccaattgtcgcttttc tcttccttgctttcttggaatcctt
    Mapping_target: C54D2
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Hawaiian_Waterston
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00000367
    Transcript: C54D2.5a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5a.1:c.2664A>G
        HGVSp: CE30919:p.Glu888=
        cDNA_position: 2792
        CDS_position: 2664
        Protein_position: 888
        Exon_number: 21/32
        Codon_change: gaA/gaG
        Amino_acid_change: E
      C54D2.5g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5g.1:c.2685A>G
        HGVSp: CE50172:p.Glu895=
        cDNA_position: 2685
        CDS_position: 2685
        Protein_position: 895
        Exon_number: 19/29
        Codon_change: gaA/gaG
        Amino_acid_change: E
      C54D2.5a.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5a.2:c.2664A>G
        HGVSp: CE30919:p.Glu888=
        cDNA_position: 2826
        CDS_position: 2664
        Protein_position: 888
        Exon_number: 22/33
        Codon_change: gaA/gaG
        Amino_acid_change: E
      C54D2.5c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5c.1:c.2664A>G
        HGVSp: CE36115:p.Glu888=
        cDNA_position: 2740
        CDS_position: 2664
        Protein_position: 888
        Exon_number: 20/31
        Codon_change: gaA/gaG
        Amino_acid_change: E
      C54D2.5a.3 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5a.3:c.2664A>G
        HGVSp: CE30919:p.Glu888=
        cDNA_position: 2741
        CDS_position: 2664
        Protein_position: 888
        Exon_number: 20/31
        Codon_change: gaA/gaG
        Amino_acid_change: E
      C54D2.5d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5d.1:c.2808A>G
        HGVSp: CE36116:p.Glu936=
        cDNA_position: 2884
        CDS_position: 2808
        Protein_position: 936
        Exon_number: 21/32
        Codon_change: gaA/gaG
        Amino_acid_change: E
      C54D2.5e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5e.1:c.2685A>G
        HGVSp: CE36117:p.Glu895=
        cDNA_position: 2761
        CDS_position: 2685
        Protein_position: 895
        Exon_number: 20/31
        Codon_change: gaA/gaG
        Amino_acid_change: E
  Remark: [20081124 db] this Variation was previously named hw105135
  Method: WGS_Hawaiian_Waterston