WormBase Tree Display for Variation: WBVar00080829
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WBVar00080829 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00080829 | |||
Other_name | haw105189 | ||||
cewivar00274712 | |||||
C39D10.8b.1:c.-156C>A | |||||
C39D10.8a.1:c.-156C>A | |||||
C39D10.8c.1:c.-156C>A | |||||
HGVSg | CHROMOSOME_X:g.7880830G>T | ||||
Sequence_details | SMap | S_parent | Sequence | C39D10 | |
Flanking_sequences | tatataaaggaacaagataagaaga | aacttctttacaatatgacccgtca | |||
Mapping_target | C39D10 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (11) | |||||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01469877 | |||
Status | Live | ||||
Affects | Gene | WBGene00016535 | |||
Transcript | C39D10.8c.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C39D10.8c.1:c.-156C>A | ||||
cDNA_position | 77 | ||||
Exon_number | 1/6 | ||||
C39D10.8b.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C39D10.8b.1:c.-156C>A | ||||
cDNA_position | 119 | ||||
Exon_number | 1/6 | ||||
C39D10.8a.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C39D10.8a.1:c.-156C>A | ||||
cDNA_position | 119 | ||||
Exon_number | 1/6 | ||||
Reference | WBPaper00040707 | ||||
Remark | [20081124 db] this Variation was previously named hw105189 | ||||
Method | WGS_Hawaiian_Waterston |