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WormBase Tree Display for Variation: WBVar00080829

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Name Class

WBVar00080829EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00080829
Other_namehaw105189
cewivar00274712
C39D10.8b.1:c.-156C>A
C39D10.8a.1:c.-156C>A
C39D10.8c.1:c.-156C>A
HGVSgCHROMOSOME_X:g.7880830G>T
Sequence_detailsSMapS_parentSequenceC39D10
Flanking_sequencestatataaaggaacaagataagaagaaacttctttacaatatgacccgtca
Mapping_targetC39D10
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryRW
QX
PersonWBPerson1562
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01469877
StatusLive
AffectsGeneWBGene00016535
TranscriptC39D10.8c.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC39D10.8c.1:c.-156C>A
cDNA_position77
Exon_number1/6
C39D10.8b.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC39D10.8b.1:c.-156C>A
cDNA_position119
Exon_number1/6
C39D10.8a.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC39D10.8a.1:c.-156C>A
cDNA_position119
Exon_number1/6
ReferenceWBPaper00040707
Remark[20081124 db] this Variation was previously named hw105189
MethodWGS_Hawaiian_Waterston