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WormBase Tree Display for Variation: WBVar00081135

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Name Class

WBVar00081135NamePublic_nameWBVar00081135
Other_namehaw105495
cewivar00274884
C17H11.6e.1:c.473-717C>T
C17H11.6d.1:c.2165-717C>T
C17H11.6c.2:c.1820-717C>T
C17H11.6c.3:c.1820-717C>T
C17H11.6c.1:c.1820-717C>T
C17H11.6a.1:c.1730-717C>T
HGVSgCHROMOSOME_X:g.8187334G>A
Sequence_detailsSMapS_parentSequenceC17H11
Flanking_sequencesaattattagctaaaggttagctaagttgctcatatatttttaataaaaaa
Mapping_targetC17H11
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00015926
TranscriptC17H11.6c.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC17H11.6c.3:c.1820-717C>T
Intron_number15/17
C17H11.6e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC17H11.6e.1:c.473-717C>T
Intron_number4/5
C17H11.6a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC17H11.6a.1:c.1730-717C>T
Intron_number12/14
C17H11.6c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC17H11.6c.1:c.1820-717C>T
Intron_number14/16
C17H11.6d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC17H11.6d.1:c.2165-717C>T
Intron_number15/16
C17H11.6c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC17H11.6c.2:c.1820-717C>T
Intron_number16/18
Remark[20081124 db] this Variation was previously named hw105495
MethodWGS_Hawaiian_Waterston