WormBase Tree Display for Variation: WBVar00081135
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WBVar00081135 | Name | Public_name | WBVar00081135 | ||
---|---|---|---|---|---|
Other_name | haw105495 | ||||
cewivar00274884 | |||||
C17H11.6e.1:c.473-717C>T | |||||
C17H11.6d.1:c.2165-717C>T | |||||
C17H11.6c.2:c.1820-717C>T | |||||
C17H11.6c.3:c.1820-717C>T | |||||
C17H11.6c.1:c.1820-717C>T | |||||
C17H11.6a.1:c.1730-717C>T | |||||
HGVSg | CHROMOSOME_X:g.8187334G>A | ||||
Sequence_details | SMap | S_parent | Sequence | C17H11 | |
Flanking_sequences | aattattagctaaaggttagctaag | ttgctcatatatttttaataaaaaa | |||
Mapping_target | C17H11 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00015926 | |||
Transcript | C17H11.6c.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C17H11.6c.3:c.1820-717C>T | ||||
Intron_number | 15/17 | ||||
C17H11.6e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C17H11.6e.1:c.473-717C>T | ||||
Intron_number | 4/5 | ||||
C17H11.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C17H11.6a.1:c.1730-717C>T | ||||
Intron_number | 12/14 | ||||
C17H11.6c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C17H11.6c.1:c.1820-717C>T | ||||
Intron_number | 14/16 | ||||
C17H11.6d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C17H11.6d.1:c.2165-717C>T | ||||
Intron_number | 15/16 | ||||
C17H11.6c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C17H11.6c.2:c.1820-717C>T | ||||
Intron_number | 16/18 | ||||
Remark | [20081124 db] this Variation was previously named hw105495 | ||||
Method | WGS_Hawaiian_Waterston |