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WormBase Tree Display for Variation: WBVar00081217

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Name Class

WBVar00081217NamePublic_nameWBVar00081217
Other_namepas4163
haw105577
cewivar00059424
F40B5.2b.1:c.189-42A>T
F40B5.2a.1:c.270-42A>T
F40B5.2b.2:c.189-42A>T
HGVSgCHROMOSOME_X:g.8369087A>T
Sequence_detailsSMapS_parentSequenceF40B5
Flanking_sequencesagaaatattacctataattttttttaaataacgtctctattttttataaa
Mapping_targetF40B5
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (24)
LaboratoryRW
PersonWBPerson1562
WBPerson6900
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar00099304
StatusLive
AffectsGeneWBGene00018226
TranscriptF40B5.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF40B5.2b.1:c.189-42A>T
Intron_number3/11
F40B5.2b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF40B5.2b.2:c.189-42A>T
Intron_number2/10
F40B5.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF40B5.2a.1:c.270-42A>T
Intron_number3/11
Remark[20081124 db] this Variation was previously named hw105577
MethodWGS_Hawaiian_Waterston