WormBase Tree Display for Variation: WBVar00081953
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WBVar00081953 | Name | Public_name | WBVar00081953 | ||
---|---|---|---|---|---|
Other_name | haw106313 | ||||
cewivar00275369 | |||||
ZK899.8c.1:c.619+7368C>T | |||||
ZK899.8k.1:c.524-8254C>T | |||||
ZK899.8i.2:c.-681+845C>T | |||||
ZK899.8e.1:c.46+845C>T | |||||
ZK899.8b.1:c.353-8254C>T | |||||
ZK899.8a.1:c.524-8254C>T | |||||
ZK899.8d.1:c.253+7368C>T | |||||
HGVSg | CHROMOSOME_X:g.9488287C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T19C11 | |
Flanking_sequences | cctcatttccttttgccttcgtttt | cagttataccattgcattccattat | |||
Mapping_target | T19C11 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001516 | |||
Transcript | ZK899.8e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK899.8e.1:c.46+845C>T | ||||
Intron_number | 2/16 | ||||
ZK899.8a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK899.8a.1:c.524-8254C>T | ||||
Intron_number | 4/19 | ||||
ZK899.8c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK899.8c.1:c.619+7368C>T | ||||
Intron_number | 2/17 | ||||
ZK899.8b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK899.8b.1:c.353-8254C>T | ||||
Intron_number | 3/19 | ||||
ZK899.8k.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK899.8k.1:c.524-8254C>T | ||||
Intron_number | 4/19 | ||||
ZK899.8i.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK899.8i.2:c.-681+845C>T | ||||
Intron_number | 1/18 | ||||
ZK899.8d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK899.8d.1:c.253+7368C>T | ||||
Intron_number | 1/16 | ||||
Remark | [20081124 db] this Variation was previously named hw106313 | ||||
Method | WGS_Hawaiian_Waterston |