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WormBase Tree Display for Variation: WBVar00081953

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Name Class

WBVar00081953NamePublic_nameWBVar00081953
Other_namehaw106313
cewivar00275369
ZK899.8c.1:c.619+7368C>T
ZK899.8k.1:c.524-8254C>T
ZK899.8i.2:c.-681+845C>T
ZK899.8e.1:c.46+845C>T
ZK899.8b.1:c.353-8254C>T
ZK899.8a.1:c.524-8254C>T
ZK899.8d.1:c.253+7368C>T
HGVSgCHROMOSOME_X:g.9488287C>T
Sequence_detailsSMapS_parentSequenceT19C11
Flanking_sequencescctcatttccttttgccttcgttttcagttataccattgcattccattat
Mapping_targetT19C11
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00001516
TranscriptZK899.8e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK899.8e.1:c.46+845C>T
Intron_number2/16
ZK899.8a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK899.8a.1:c.524-8254C>T
Intron_number4/19
ZK899.8c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK899.8c.1:c.619+7368C>T
Intron_number2/17
ZK899.8b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK899.8b.1:c.353-8254C>T
Intron_number3/19
ZK899.8k.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK899.8k.1:c.524-8254C>T
Intron_number4/19
ZK899.8i.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK899.8i.2:c.-681+845C>T
Intron_number1/18
ZK899.8d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK899.8d.1:c.253+7368C>T
Intron_number1/16
Remark[20081124 db] this Variation was previously named hw106313
MethodWGS_Hawaiian_Waterston