WormBase Tree Display for Variation: WBVar00082270
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WBVar00082270 | Name | Public_name | WBVar00082270 | ||
---|---|---|---|---|---|
Other_name | haw106630 | ||||
cewivar00275510 | |||||
CE42309:p.Leu124= | |||||
C14H10.3a.1:c.370T>C | |||||
C14H10.3b.2:c.166T>C | |||||
CE42453:p.Leu56= | |||||
C14H10.3b.1:c.166T>C | |||||
HGVSg | CHROMOSOME_X:g.10223849A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C14H10 | |
Flanking_sequences | gccgaagtgaccaaagttcttccca | ttcagaaagcttctgtccctctctc | |||
Mapping_target | C14H10 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00007593 | |||
Transcript | C14H10.3b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C14H10.3b.1:c.166T>C | ||||
HGVSp | CE42453:p.Leu56= | ||||
cDNA_position | 402 | ||||
CDS_position | 166 | ||||
Protein_position | 56 | ||||
Exon_number | 5/14 | ||||
Codon_change | Ttg/Ctg | ||||
Amino_acid_change | L | ||||
C14H10.3a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | C14H10.3a.1:c.370T>C | ||||
HGVSp | CE42309:p.Leu124= | ||||
cDNA_position | 371 | ||||
CDS_position | 370 | ||||
Protein_position | 124 | ||||
Exon_number | 5/14 | ||||
Codon_change | Ttg/Ctg | ||||
Amino_acid_change | L | ||||
C14H10.3b.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | C14H10.3b.2:c.166T>C | ||||
HGVSp | CE42453:p.Leu56= | ||||
cDNA_position | 308 | ||||
CDS_position | 166 | ||||
Protein_position | 56 | ||||
Exon_number | 4/13 | ||||
Codon_change | Ttg/Ctg | ||||
Amino_acid_change | L | ||||
Remark | [20081124 db] this Variation was previously named hw106630 | ||||
Method | WGS_Hawaiian_Waterston |