WormBase Tree Display for Variation: WBVar00082828
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WBVar00082828 | Name | Public_name | WBVar00082828 | ||
---|---|---|---|---|---|
Other_name | pas4763 | ||||
haw107188 | |||||
cewivar00061549 | |||||
F31B12.1g.1:c.968+80A>C | |||||
F31B12.1h.1:c.968+80A>C | |||||
F31B12.1d.1:c.968+80A>C | |||||
F31B12.1l.1:c.968+80A>C | |||||
F31B12.1k.1:c.968+80A>C | |||||
F31B12.1j.1:c.968+80A>C | |||||
F31B12.1i.1:c.968+80A>C | |||||
HGVSg | CHROMOSOME_X:g.10828021T>G | ||||
Sequence_details | SMap | S_parent | Sequence | C05A9 | |
Flanking_sequences | atttttatacaacctttacggctta | tacgtattttttattggttataaaa | |||
Mapping_target | C05A9 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (21) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00099904 | |||
Status | Live | ||||
Affects | Gene | WBGene00004036 | |||
Transcript | F31B12.1j.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1j.1:c.968+80A>C | ||||
Intron_number | 10/63 | ||||
F31B12.1g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1g.1:c.968+80A>C | ||||
Intron_number | 10/63 | ||||
F31B12.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1d.1:c.968+80A>C | ||||
Intron_number | 10/64 | ||||
F31B12.1h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1h.1:c.968+80A>C | ||||
Intron_number | 10/63 | ||||
F31B12.1l.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1l.1:c.968+80A>C | ||||
Intron_number | 10/63 | ||||
F31B12.1i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1i.1:c.968+80A>C | ||||
Intron_number | 10/64 | ||||
F31B12.1k.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1k.1:c.968+80A>C | ||||
Intron_number | 10/64 | ||||
Remark | [20081124 db] this Variation was previously named hw107188 | ||||
Method | WGS_Hawaiian_Waterston |