WormBase Tree Display for Variation: WBVar00082881
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WBVar00082881 | Name | Public_name | WBVar00082881 | ||
---|---|---|---|---|---|
Other_name | haw107241 | ||||
cewivar00129264 | |||||
F47B10.8d.1:c.73+6T>C | |||||
F47B10.8a.1:c.-192T>C | |||||
F47B10.8c.1:c.104-256T>C | |||||
F47B10.8b.1:c.242-256T>C | |||||
HGVSg | CHROMOSOME_X:g.10906772A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F47B10 | |
Flanking_sequences | aatagaagtgtagtaaagaaaatcg | cttacaatgcggaatcttgataatt | |||
Mapping_target | F47B10 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00009819 | |||
Transcript | F47B10.8d.1 | VEP_consequence | splice_region_variant,intron_variant | ||
VEP_impact | LOW | ||||
HGVSc | F47B10.8d.1:c.73+6T>C | ||||
Intron_number | 2/8 | ||||
F47B10.8a.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F47B10.8a.1:c.-192T>C | ||||
cDNA_position | 1692 | ||||
Exon_number | 1/8 | ||||
F47B10.8b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F47B10.8b.1:c.242-256T>C | ||||
Intron_number | 2/8 | ||||
F47B10.8c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F47B10.8c.1:c.104-256T>C | ||||
Intron_number | 2/8 | ||||
Remark | [20081124 db] this Variation was previously named hw107241 | ||||
Method | WGS_Hawaiian_Waterston |