WormBase Tree Display for Variation: WBVar00082967
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WBVar00082967 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00082967 | |||
Other_name | haw107327 | ||||
cewivar00275835 | |||||
W04G3.2.1:c.490-7A>T | |||||
HGVSg | CHROMOSOME_X:g.11062852A>T | ||||
Sequence_details | SMap | S_parent | Sequence | W04G3 | |
Flanking_sequences | tctgtcagtccgttttaaaatttgt | ttttaggtattcttgaagttggcaa | |||
Mapping_target | W04G3 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Andersen | |||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Andersen | |||||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01471051 | |||
Status | Live | ||||
Affects | Gene | WBGene00012256 | |||
Transcript | W04G3.2.1 | VEP_consequence | splice_region_variant,intron_variant | ||
VEP_impact | LOW | ||||
HGVSc | W04G3.2.1:c.490-7A>T | ||||
Intron_number | 2/7 | ||||
Reference | WBPaper00040707 | ||||
Remark | [20081124 db] this Variation was previously named hw107327 | ||||
Method | WGS_Hawaiian_Waterston |