WormBase Tree Display for Variation: WBVar00083209
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WBVar00083209 | Name | Public_name | WBVar00083209 | ||
---|---|---|---|---|---|
Other_name | haw107569 | ||||
cewivar00275989 | |||||
CE18542:p.Thr1918= | |||||
C35C5.1.1:c.5754T>A | |||||
HGVSg | CHROMOSOME_X:g.11529618T>A | ||||
Sequence_details | SMap | S_parent | Sequence | C35C5 | |
Flanking_sequences | caaattttacagttaacaatatgac | cactccgaggaaaaacaaatcaaac | |||
Mapping_target | C35C5 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00004746 | |||
Transcript | C35C5.1.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C35C5.1.1:c.5754T>A | ||||
HGVSp | CE18542:p.Thr1918= | ||||
cDNA_position | 5786 | ||||
CDS_position | 5754 | ||||
Protein_position | 1918 | ||||
Exon_number | 13/21 | ||||
Codon_change | acT/acA | ||||
Amino_acid_change | T | ||||
Remark | [20081124 db] this Variation was previously named hw107569 | ||||
Method | WGS_Hawaiian_Waterston |