WormBase Tree Display for Variation: WBVar00083534
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WBVar00083534 | Name | Public_name | WBVar00083534 | ||
---|---|---|---|---|---|
Other_name | haw107894 | ||||
cewivar00276262 | |||||
F17E5.2.2:c.41C>T | |||||
CE37355:p.Ser14Leu | |||||
F17E5.2.1:c.41C>T | |||||
HGVSg | CHROMOSOME_X:g.12394456C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F17E5 | |
Flanking_sequences | gaatctccgtcgctacgaggtggat | gatattggaaaataagcagggtgag | |||
Mapping_target | F17E5 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00008924 | |||
Transcript | F17E5.2.2 | VEP_consequence | missense_variant | ||
VEP_impact | MODERATE | ||||
HGVSc | F17E5.2.2:c.41C>T | ||||
HGVSp | CE37355:p.Ser14Leu | ||||
cDNA_position | 153 | ||||
CDS_position | 41 | ||||
Protein_position | 14 | ||||
Exon_number | 3/15 | ||||
Codon_change | tCg/tTg | ||||
Amino_acid_change | S/L | ||||
F17E5.2.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | ||||
HGVSc | F17E5.2.1:c.41C>T | ||||
HGVSp | CE37355:p.Ser14Leu | ||||
cDNA_position | 129 | ||||
CDS_position | 41 | ||||
Protein_position | 14 | ||||
Exon_number | 3/15 | ||||
Codon_change | tCg/tTg | ||||
Amino_acid_change | S/L | ||||
Remark | [20081124 db] this Variation was previously named hw107894 | ||||
Method | WGS_Hawaiian_Waterston |