WormBase Tree Display for Variation: WBVar00083790
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| WBVar00083790 | Name | Public_name | WBVar00083790 | ||
|---|---|---|---|---|---|
| Other_name | haw108150 | ||||
| cewivar00158569 | |||||
| F11C1.5a.2:c.1776G>A | |||||
| CE48441:p.Lys592= | |||||
| F11C1.5e.1:c.1776G>A | |||||
| F11C1.5a.1:c.1776G>A | |||||
| CE41311:p.Lys592= | |||||
| HGVSg | CHROMOSOME_X:g.12994249G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F11C1 | |
| Flanking_sequences | ctgaatctgtggacaaacttatcaa | tttgtgcaaactatcaaaaactcca | |||
| Mapping_target | F11C1 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00008694 | |||
| Transcript | F11C1.5e.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F11C1.5e.1:c.1776G>A | ||||
| HGVSp | CE48441:p.Lys592= | ||||
| cDNA_position | 1805 | ||||
| CDS_position | 1776 | ||||
| Protein_position | 592 | ||||
| Exon_number | 8/14 | ||||
| Codon_change | aaG/aaA | ||||
| Amino_acid_change | K | ||||
| F11C1.5a.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F11C1.5a.2:c.1776G>A | ||||
| HGVSp | CE41311:p.Lys592= | ||||
| cDNA_position | 1786 | ||||
| CDS_position | 1776 | ||||
| Protein_position | 592 | ||||
| Exon_number | 8/30 | ||||
| Codon_change | aaG/aaA | ||||
| Amino_acid_change | K | ||||
| F11C1.5a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F11C1.5a.1:c.1776G>A | ||||
| HGVSp | CE41311:p.Lys592= | ||||
| cDNA_position | 1799 | ||||
| CDS_position | 1776 | ||||
| Protein_position | 592 | ||||
| Exon_number | 8/30 | ||||
| Codon_change | aaG/aaA | ||||
| Amino_acid_change | K | ||||
| Remark | [20081124 db] this Variation was previously named hw108150 | ||||
| Method | WGS_Hawaiian_Waterston |
