WormBase Tree Display for Variation: WBVar00085003

WBVar00085003 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar00085003
    Other_name: pas30043
      haw109363
      cewivar00117347
      C11H1.7a.1:c.*4T>C
      C11H1.7a.2:c.*4T>C
    HGVSg: CHROMOSOME_X:g.14330139T>C
  Sequence_details: SMap: S_parent: Sequence: VK04G11
    Flanking_sequences: ggaccacaaacaagaattatgatta gattgtttgtattgtgatctttatt
    Mapping_target: VK04G11
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (59)
    Laboratory: RW
      QX
    Person: WBPerson1562
      WBPerson6900
      WBPerson1730
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
      WGS_Andersen
    History: Acquires_merge: WBVar00218267
        WBVar01472444
    Status: Live
  Affects: Gene: WBGene00007531
    Transcript: C11H1.7a.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C11H1.7a.2:c.*4T>C
        cDNA_position: 867
        Exon_number: 8/8
      C11H1.7a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C11H1.7a.1:c.*4T>C
        cDNA_position: 778
        Exon_number: 7/7
  Reference: WBPaper00040707
  Remark: [20081124 db] this Variation was previously named hw109363
  Method: WGS_Hawaiian_Waterston