WormBase Tree Display for Variation: WBVar00085028
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WBVar00085028 | Name | Public_name | WBVar00085028 | ||
---|---|---|---|---|---|
Other_name | haw109388 | ||||
cewivar00276980 | |||||
K04G11.5c.1:c.216-251G>A | |||||
K04G11.5a.3:c.186-251G>A | |||||
K04G11.5a.2:c.186-251G>A | |||||
K04G11.5d.1:c.186-266G>A | |||||
K04G11.5a.1:c.186-251G>A | |||||
K04G11.5b.1:c.216-266G>A | |||||
HGVSg | CHROMOSOME_X:g.14357788C>T | ||||
Sequence_details | SMap | S_parent | Sequence | K04G11 | |
Flanking_sequences | gaaaatgaataatgttactttaagc | atgcatttttattctttaaaaaatt | |||
Mapping_target | K04G11 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00002151 | |||
Transcript | K04G11.5b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K04G11.5b.1:c.216-266G>A | ||||
Intron_number | 3/11 | ||||
K04G11.5a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K04G11.5a.3:c.186-251G>A | ||||
Intron_number | 4/12 | ||||
K04G11.5c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K04G11.5c.1:c.216-251G>A | ||||
Intron_number | 3/10 | ||||
K04G11.5a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K04G11.5a.2:c.186-251G>A | ||||
Intron_number | 4/12 | ||||
K04G11.5a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K04G11.5a.1:c.186-251G>A | ||||
Intron_number | 3/11 | ||||
K04G11.5d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K04G11.5d.1:c.186-266G>A | ||||
Intron_number | 2/9 | ||||
Remark | [20081124 db] this Variation was previously named hw109388 | ||||
Method | WGS_Hawaiian_Waterston |