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WormBase Tree Display for Variation: WBVar00085028

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Name Class

WBVar00085028NamePublic_nameWBVar00085028
Other_namehaw109388
cewivar00276980
K04G11.5c.1:c.216-251G>A
K04G11.5a.3:c.186-251G>A
K04G11.5a.2:c.186-251G>A
K04G11.5d.1:c.186-266G>A
K04G11.5a.1:c.186-251G>A
K04G11.5b.1:c.216-266G>A
HGVSgCHROMOSOME_X:g.14357788C>T
Sequence_detailsSMapS_parentSequenceK04G11
Flanking_sequencesgaaaatgaataatgttactttaagcatgcatttttattctttaaaaaatt
Mapping_targetK04G11
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00002151
TranscriptK04G11.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04G11.5b.1:c.216-266G>A
Intron_number3/11
K04G11.5a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04G11.5a.3:c.186-251G>A
Intron_number4/12
K04G11.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04G11.5c.1:c.216-251G>A
Intron_number3/10
K04G11.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04G11.5a.2:c.186-251G>A
Intron_number4/12
K04G11.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04G11.5a.1:c.186-251G>A
Intron_number3/11
K04G11.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04G11.5d.1:c.186-266G>A
Intron_number2/9
Remark[20081124 db] this Variation was previously named hw109388
MethodWGS_Hawaiian_Waterston