WormBase Tree Display for Variation: WBVar00085389

WBVar00085389 Name: Public_name: WBVar00085389
    Other_name (18)
    HGVSg: CHROMOSOME_X:g.14611438C>T
  Sequence_details: SMap: S_parent: Sequence: F54E4
    Flanking_sequences: atcaggtgatcacaggagcgttgaa aatggtgaaaatgtatatgcgttag
    Mapping_target: F54E4
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Hawaiian_Waterston
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00004313
    Transcript: F54E4.1a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F54E4.1a.1:c.36C>T
        HGVSp: CE47867:p.Asn12=
        cDNA_position: 59
        CDS_position: 36
        Protein_position: 12
        Exon_number: 2/34
        Codon_change: aaC/aaT
        Amino_acid_change: N
      F54E4.1g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F54E4.1g.1:c.36C>T
        HGVSp: CE53145:p.Asn12=
        cDNA_position: 65
        CDS_position: 36
        Protein_position: 12
        Exon_number: 2/35
        Codon_change: aaC/aaT
        Amino_acid_change: N
      F54E4.1e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F54E4.1e.1:c.36C>T
        HGVSp: CE53335:p.Asn12=
        cDNA_position: 36
        CDS_position: 36
        Protein_position: 12
        Exon_number: 1/33
        Codon_change: aaC/aaT
        Amino_acid_change: N
      F54E4.1d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F54E4.1d.1:c.36C>T
        HGVSp: CE53152:p.Asn12=
        cDNA_position: 36
        CDS_position: 36
        Protein_position: 12
        Exon_number: 1/32
        Codon_change: aaC/aaT
        Amino_acid_change: N
      F54E4.1f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F54E4.1f.1:c.36C>T
        HGVSp: CE53441:p.Asn12=
        cDNA_position: 36
        CDS_position: 36
        Protein_position: 12
        Exon_number: 1/32
        Codon_change: aaC/aaT
        Amino_acid_change: N
      F54E4.1c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F54E4.1c.1:c.36C>T
        HGVSp: CE53448:p.Asn12=
        cDNA_position: 36
        CDS_position: 36
        Protein_position: 12
        Exon_number: 1/33
        Codon_change: aaC/aaT
        Amino_acid_change: N
      F54E4.1h.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F54E4.1h.1:c.36C>T
        HGVSp: CE53229:p.Asn12=
        cDNA_position: 59
        CDS_position: 36
        Protein_position: 12
        Exon_number: 2/34
        Codon_change: aaC/aaT
        Amino_acid_change: N
      F54E4.1b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F54E4.1b.1:c.36C>T
        HGVSp: CE47930:p.Asn12=
        cDNA_position: 36
        CDS_position: 36
        Protein_position: 12
        Exon_number: 1/34
        Codon_change: aaC/aaT
        Amino_acid_change: N
  Remark: [20081124 db] this Variation was previously named hw109749
  Method: WGS_Hawaiian_Waterston