WormBase Tree Display for Variation: WBVar00085553
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WBVar00085553 | Name | Public_name | WBVar00085553 | ||
---|---|---|---|---|---|
Other_name | haw109913 | ||||
cewivar00062533 | |||||
C05G5.5c.1:c.558-254A>G | |||||
C05G5.5b.1:c.711-254A>G | |||||
C05G5.5a.1:c.1080-254A>G | |||||
HGVSg | CHROMOSOME_X:g.14756512T>C | ||||
Sequence_details | SMap | S_parent | Sequence | C05G5 | |
Flanking_sequences | agcaactggacctatgtatctttta | atagtttcttcccttgtttaaattc | |||
Mapping_target | C05G5 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (18) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00007351 | |||
Transcript | C05G5.5c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C05G5.5c.1:c.558-254A>G | ||||
Intron_number | 3/3 | ||||
C05G5.5b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C05G5.5b.1:c.711-254A>G | ||||
Intron_number | 4/4 | ||||
C05G5.5a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C05G5.5a.1:c.1080-254A>G | ||||
Intron_number | 8/9 | ||||
Remark | [20081124 db] this Variation was previously named hw109913 | ||||
Method | WGS_Hawaiian_Waterston |