WormBase Tree Display for Variation: WBVar00085627

WBVar00085627 Name: Public_name: WBVar00085627
    Other_name: pas30541
      haw109987
      cewivar00062646
      F42D1.3.3:c.-48-1282A>T
      F42D1.3.2:c.-48-1282A>T
    HGVSg: CHROMOSOME_X:g.14798838A>T
  Sequence_details: SMap: S_parent: Sequence: F42D1
    Flanking_sequences: attttaaaatctcgaaaatgcctgc tcctggatgtttcgaagaaagccat
    Mapping_target: F42D1
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (40)
    Laboratory: RW
    Person: WBPerson1562
      WBPerson6900
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar00218765
    Status: Live
  Affects: Gene: WBGene00009629
    Transcript: F42D1.3.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F42D1.3.3:c.-48-1282A>T
        Intron_number: 1/13
      F42D1.3.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F42D1.3.2:c.-48-1282A>T
        Intron_number: 2/14
  Remark: [20081124 db] this Variation was previously named hw109987
  Method: WGS_Hawaiian_Waterston