WormBase Tree Display for Variation: WBVar00085634
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WBVar00085634 | Name | Public_name | WBVar00085634 | ||
---|---|---|---|---|---|
Other_name | haw109994 | ||||
cewivar00062652 | |||||
F42D1.3.3:c.668+152C>T | |||||
F42D1.3.2:c.668+152C>T | |||||
F42D1.3.1:c.668+152C>T | |||||
HGVSg | CHROMOSOME_X:g.14802463C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F42D1 | |
Flanking_sequences | gcttgaaattgggctttgaaatttt | ttaatcgcagacaaaagtgaaatta | |||
Mapping_target | F42D1 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (21) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00009629 | |||
Transcript | F42D1.3.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F42D1.3.1:c.668+152C>T | ||||
Intron_number | 7/12 | ||||
F42D1.3.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F42D1.3.3:c.668+152C>T | ||||
Intron_number | 8/13 | ||||
F42D1.3.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F42D1.3.2:c.668+152C>T | ||||
Intron_number | 9/14 | ||||
Remark | [20081124 db] this Variation was previously named hw109994 | ||||
Method | WGS_Hawaiian_Waterston |