WormBase Tree Display for Variation: WBVar00086105
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| WBVar00086105 | Name | Public_name | WBVar00086105 | ||
|---|---|---|---|---|---|
| Other_name (12) | |||||
| HGVSg | CHROMOSOME_X:g.15127208C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | R07D5 | |
| Flanking_sequences | tggattagattaaagttttgaaatt | aacacaacacaagtcaacacatttc | |||
| Mapping_target | R07D5 | ||||
| Type_of_mutation | Substitution | C | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006747 | |||
| Transcript | R07D5.1i.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | R07D5.1i.1:c.58-33G>T | ||||
| Intron_number | 2/11 | ||||
| R07D5.1a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R07D5.1a.2:c.196-33G>T | ||||
| Intron_number | 2/11 | ||||
| R07D5.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R07D5.1f.1:c.19-33G>T | ||||
| Intron_number | 1/9 | ||||
| R07D5.1h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R07D5.1h.1:c.58-33G>T | ||||
| Intron_number | 1/9 | ||||
| R07D5.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R07D5.1c.1:c.-165-33G>T | ||||
| Intron_number | 1/11 | ||||
| R07D5.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R07D5.1a.1:c.196-33G>T | ||||
| Intron_number | 3/12 | ||||
| R07D5.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R07D5.1g.1:c.19-33G>T | ||||
| Intron_number | 2/11 | ||||
| R07D5.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R07D5.1d.1:c.268-33G>T | ||||
| Intron_number | 1/9 | ||||
| R07D5.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R07D5.1e.1:c.268-33G>T | ||||
| Intron_number | 1/10 | ||||
| R07D5.1j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R07D5.1j.1:c.196-33G>T | ||||
| Intron_number | 1/9 | ||||
| Remark | [20081124 db] this Variation was previously named hw110465 | ||||
| Method | WGS_Hawaiian_Waterston |
