WormBase Tree Display for Variation: WBVar00086116

WBVar00086116 Name: Public_name: WBVar00086116
    Other_name (11)
    HGVSg: CHROMOSOME_X:g.15130022G>A
  Sequence_details: SMap: S_parent: Sequence: R07D5
    Flanking_sequences: aaatgtggtttgcctatccagtatt tgaataactaaatctattctgtttt
    Mapping_target: R07D5
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (37)
    Laboratory: RW
    Person: WBPerson1562
      WBPerson6900
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar00221635
    Status: Live
  Affects: Gene: WBGene00006747
    Transcript: R07D5.1i.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1i.1:c.57+1731C>T
        Intron_number: 2/11
      R07D5.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1f.1:c.19-2847C>T
        Intron_number: 1/9
      R07D5.1h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1h.1:c.57+1731C>T
        Intron_number: 1/9
      R07D5.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1c.1:c.-165-2847C>T
        Intron_number: 1/11
      R07D5.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1a.1:c.-8-2440C>T
        Intron_number: 1/12
      R07D5.1g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1g.1:c.19-2847C>T
        Intron_number: 2/11
      R07D5.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1d.1:c.268-2847C>T
        Intron_number: 1/9
      R07D5.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R07D5.1e.1:c.268-2847C>T
        Intron_number: 1/10
  Remark: [20081124 db] this Variation was previously named hw110476
  Method: WGS_Hawaiian_Waterston