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WormBase Tree Display for Variation: WBVar00086284

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Name Class

WBVar00086284NamePublic_nameWBVar00086284
Other_namehaw110644
cewivar00063416
F46F2.2a.1:c.1108+338T>A
F46F2.2d.1:c.1108+338T>A
F46F2.2c.1:c.1108+338T>A
F46F2.2b.1:c.562+338T>A
F46F2.2g.1:c.595+338T>A
F46F2.2f.1:c.562+338T>A
F46F2.2f.2:c.562+338T>A
F46F2.2e.1:c.562+338T>A
HGVSgCHROMOSOME_X:g.15271990A>T
Sequence_detailsSMapS_parentSequenceF46F2
Flanking_sequencescttcaaaaaattttagattttttttaattttctggtcaaagttttggcaa
Mapping_targetF46F2
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000032From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00022868From_analysisMillion_mutation_project_reanalysis
WBStrain00022887From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00002203
TranscriptF46F2.2e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF46F2.2e.1:c.562+338T>A
Intron_number2/5
F46F2.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF46F2.2d.1:c.1108+338T>A
Intron_number4/8
F46F2.2f.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF46F2.2f.2:c.562+338T>A
Intron_number2/5
F46F2.2g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF46F2.2g.1:c.595+338T>A
Intron_number4/8
F46F2.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF46F2.2a.1:c.1108+338T>A
Intron_number4/7
F46F2.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF46F2.2b.1:c.562+338T>A
Intron_number3/5
F46F2.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF46F2.2c.1:c.1108+338T>A
Intron_number4/6
F46F2.2f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF46F2.2f.1:c.562+338T>A
Intron_number2/6
Remark[20081124 db] this Variation was previously named hw110644
MethodWGS_Hawaiian_Waterston