WormBase Tree Display for Variation: WBVar00086284
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WBVar00086284 | Name | Public_name | WBVar00086284 | ||
---|---|---|---|---|---|
Other_name | haw110644 | ||||
cewivar00063416 | |||||
F46F2.2a.1:c.1108+338T>A | |||||
F46F2.2d.1:c.1108+338T>A | |||||
F46F2.2c.1:c.1108+338T>A | |||||
F46F2.2b.1:c.562+338T>A | |||||
F46F2.2g.1:c.595+338T>A | |||||
F46F2.2f.1:c.562+338T>A | |||||
F46F2.2f.2:c.562+338T>A | |||||
F46F2.2e.1:c.562+338T>A | |||||
HGVSg | CHROMOSOME_X:g.15271990A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F46F2 | |
Flanking_sequences | cttcaaaaaattttagatttttttt | aattttctggtcaaagttttggcaa | |||
Mapping_target | F46F2 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00002203 | |||
Transcript | F46F2.2e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F46F2.2e.1:c.562+338T>A | ||||
Intron_number | 2/5 | ||||
F46F2.2d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F46F2.2d.1:c.1108+338T>A | ||||
Intron_number | 4/8 | ||||
F46F2.2f.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F46F2.2f.2:c.562+338T>A | ||||
Intron_number | 2/5 | ||||
F46F2.2g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F46F2.2g.1:c.595+338T>A | ||||
Intron_number | 4/8 | ||||
F46F2.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F46F2.2a.1:c.1108+338T>A | ||||
Intron_number | 4/7 | ||||
F46F2.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F46F2.2b.1:c.562+338T>A | ||||
Intron_number | 3/5 | ||||
F46F2.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F46F2.2c.1:c.1108+338T>A | ||||
Intron_number | 4/6 | ||||
F46F2.2f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F46F2.2f.1:c.562+338T>A | ||||
Intron_number | 2/6 | ||||
Remark | [20081124 db] this Variation was previously named hw110644 | ||||
Method | WGS_Hawaiian_Waterston |