WormBase Tree Display for Variation: WBVar00086462

WBVar00086462 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar00086462
    Other_name: haw110822
      cewivar00277479
      F39D8.2c.1:c.91-1113A>G
      F39D8.2b.1:c.187-1113A>G
      F39D8.2a.1:c.289-1113A>G
    HGVSg: CHROMOSOME_X:g.15416371A>G
  Sequence_details: SMap: S_parent: Sequence: F39D8
    Flanking_sequences: cagattcacccggatagttggtgaa aatttgttacgatcggcgaacgcgt
    Mapping_target: F39D8
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
          WGS_Andersen
    Laboratory: RW
      QX
    Person: WBPerson1562
      WBPerson1730
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      WGS_Andersen
    History: Acquires_merge: WBVar01472902
    Status: Live
  Affects: Gene: WBGene00009560
    Transcript: F39D8.2c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39D8.2c.1:c.91-1113A>G
        Intron_number: 1/3
      F39D8.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39D8.2a.1:c.289-1113A>G
        Intron_number: 2/5
      F39D8.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39D8.2b.1:c.187-1113A>G
        Intron_number: 3/6
  Reference: WBPaper00040707
  Remark: [20081124 db] this Variation was previously named hw110822
  Method: WGS_Hawaiian_Waterston