WormBase Tree Display for Variation: WBVar00086762
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WBVar00086762 | Name | Public_name | WBVar00086762 | ||
---|---|---|---|---|---|
Other_name | haw111122 | ||||
cewivar00064125 | |||||
ZK662.3a.1:c.10-627C>T | |||||
ZK662.3c.1:c.10-627C>T | |||||
ZK662.3b.1:c.10-627C>T | |||||
ZK662.3d.1:c.10-627C>T | |||||
HGVSg | CHROMOSOME_X:g.15709429C>T | ||||
Sequence_details | SMap | S_parent | Sequence | ZK662 | |
Flanking_sequences | acatctgtctacgtcaaactaaaca | aaaagcaacaattttgcaaacatca | |||
Mapping_target | ZK662 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (13) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00003638 | |||
Transcript | ZK662.3c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK662.3c.1:c.10-627C>T | ||||
Intron_number | 1/15 | ||||
ZK662.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK662.3d.1:c.10-627C>T | ||||
Intron_number | 1/15 | ||||
ZK662.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK662.3a.1:c.10-627C>T | ||||
Intron_number | 2/17 | ||||
ZK662.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK662.3b.1:c.10-627C>T | ||||
Intron_number | 2/17 | ||||
Remark | [20081124 db] this Variation was previously named hw111122 | ||||
Method | WGS_Hawaiian_Waterston |