WormBase Tree Display for Variation: WBVar00089416

WBVar00089416 Evidence: Person_evidence: WBPerson6404
  Name: Public_name: n316
    Other_name: DY3.7.2:c.543-1G>A
      DY3.7.1:c.543-1G>A
    HGVSg: CHROMOSOME_I:g.8794133G>A
  Sequence_details: SMap: S_parent: Sequence: DY3
    Flanking_sequences: tttcaaattttaatcaaattaattattcca agatgccgaaaacctatccgaacaaatgca
    Mapping_target: DY3
    Type_of_mutation: Substitution: g a Person_evidence: WBPerson6404
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00026895
      WBStrain00040641
      WBStrain00040643
      WBStrain00040644
      WBStrain00040645
    Laboratory: MT
    Status: Live
  Affects: Gene: WBGene00006324
    Transcript: DY3.7.1 VEP_consequence: splice_acceptor_variant
        VEP_impact: HIGH
        HGVSc: DY3.7.1:c.543-1G>A
        Intron_number: 7/16
      DY3.7.2 VEP_consequence: splice_acceptor_variant
        VEP_impact: HIGH
        HGVSc: DY3.7.2:c.543-1G>A
        Intron_number: 6/15
    Interactor: WBInteraction000518996
  Genetics: Interpolated_map_position: I 3.1298
    Mapping_data: In_2_point: 2496
      In_multi_point: 693
        694
        695
        975
      In_pos_neg_data: 744
        753
        762
  Description: Phenotype: WBPhenotype:0000052 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: n316/nDf24 is maternal effect lethal Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0000070 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: male tail abnormal Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
        Recessive: Person_evidence: WBPerson261
          Curator_confirmed: WBPerson712
      WBPhenotype:0000239 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: abnormal vulval cell lineages Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
        Recessive: Person_evidence: WBPerson261
          Curator_confirmed: WBPerson712
      WBPhenotype:0000384 Paper_evidence: WBPaper00049274
        Curator_confirmed: WBPerson850
        Remark: SDQL axon guidance is defective Paper_evidence: WBPaper00049274
            Curator_confirmed: WBPerson850
      WBPhenotype:0000583 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: phenotype alone is recessive Dpy, phenotype stronger at 25C Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
        Recessive: Person_evidence: WBPerson261
          Curator_confirmed: WBPerson712
        Temperature_sensitive: Heat_sensitive: 25 Person_evidence: WBPerson261
              Curator_confirmed: WBPerson712
        Ease_of_scoring: ES2_Difficult_to_score: Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0000640 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: recessive Egl, phenotype stronger at 25C Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
        Recessive: Person_evidence: WBPerson261
          Curator_confirmed: WBPerson712
        Temperature_sensitive: Heat_sensitive: 25 Person_evidence: WBPerson261
              Curator_confirmed: WBPerson712
  Reference: WBPaper00016406
    WBPaper00011739
    WBPaper00049274
  Method: Substitution_allele